Mar 23, 2026

SecureBox: A Layered Control Protocol for Safe AI-Assisted Coding

Siddhanth Manoj , Satwikk, Sonali Moorthy

With the proliferation of the capabilities and applicability of generative AI, the development of control protocols to combat systemic safety compromise is not trivial. Existing defenses like prompt-level safety instructions, single model oversight, and static policies are susceptible to workarounds, and fail to catch subtle contextual threats such as unsafe logic, stealthy backdoor insertion, and multi-step threat accumulation under the guise of intelligent prompting. In this project, we develop a security-focused AI coding pipeline designed to mitigate these issues through stratified control mechanisms. Our system combines a prompt refining module that structures and sanitizes user inputs, an advanced security agent that analyzes generated code and commands for potentially harmful behavior, and a benchmarking framework to evaluate the overall pipeline in comparison to popular models. We implement multiple protocols—including baseline, reprompting-only, security-only, and combined approaches—and test them on a curated dataset of both benign and adversarial tasks. Our results show that integrating prompt-level defenses with downstream security analysis can significantly reduce synthesis of unsafe outputs while maintaining strong task performance (e.g., X% reduction in unsafe actions with minimal drop in success rate). Overall, this work demonstrates the value of modular, defense-in-depth designs and provides a reproducible framework for evaluating safety–usefulness tradeoffs in AI-assisted software development.

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Cite this work

@misc {

title={

(HckPrj) SecureBox: A Layered Control Protocol for Safe AI-Assisted Coding

},

author={

Siddhanth Manoj , Satwikk, Sonali Moorthy

},

date={

3/23/26

},

organization={Apart Research},

note={Research submission to the research sprint hosted by Apart.},

howpublished={https://apartresearch.com}

}

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This work was done during one weekend by research workshop participants and does not represent the work of Apart Research.
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